BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028D05SP1|AL428894
(839 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1305 1653 0.0
>3x_Contig1305
Length = 9229
Score = 1653 bits (833), Expect = 0.0
Identities = 837/839 (99%)
Strand = Plus / Minus
Query: 1 gatcccaaattactggaaattttcaaccctggaacggttttacgagttttcctttcatcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3977 gatcccaaattactggaaattttcaaccctggaacggttttacgagttttcctttcatcg 3918
Query: 61 cttctacgattctgtctggtacccaaattttgaactttgcctgahatctcactatactca 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 3917 cttctacgattctgtctggtacccaaattttgaactttgcctgaaatctcactatactca 3858
Query: 121 ttagtaccggtaatctttggtgtctgtcttttagccgtacctgtttgtactaccgggcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3857 ttagtaccggtaatctttggtgtctgtcttttagccgtacctgtttgtactaccgggcca 3798
Query: 181 ttggttcctctagtatccgttctttgtgttctttctctaaaatttttaccaccacggtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3797 ttggttcctctagtatccgttctttgtgttctttctctaaaatttttaccaccacggtct 3738
Query: 241 tgaccattacggacttgtctattatccctgggtttatttcctccggatctgtcatcaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3737 tgaccattacggacttgtctattatccctgggtttatttcctccggatctgtcatcaaat 3678
Query: 301 cttgctgtttgtctcttatcttccctcccagctgacctcacctttctgtcagatcttggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3677 cttgctgtttgtctcttatcttccctcccagctgacctcacctttctgtcagatcttggt 3618
Query: 361 ttacgtggttctcttgccttgataggaacttccttcactctttgcaaaactgatgctaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3617 ttacgtggttctcttgccttgataggaacttccttcactctttgcaaaactgatgctaaa 3558
Query: 421 aagtccggagagacagagctataagcccttttagagaatgtagaagctagcattattaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3557 aagtccggagagacagagctataagcccttttagagaatgtagaagctagcattattaag 3498
Query: 481 taaatatattaatgctagtcacacacttaaacagatcacaacttgatatagcgttacctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3497 taaatatattaatgctagtcacacacttaaacagatcacaacttgatatagcgttacctg 3438
Query: 541 gtttattacaaccctatacctaaatatctccgtgataccataagaactaatcaagttcat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3437 gtttattacaaccctatacctaaatatctccgtgataccataagaactaatcaagttcat 3378
Query: 601 catactgaaacgagtttcgcactctcataggttttatgaaagatcaaaaattttcaaggc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3377 catactgaaacgagtttcgcactctcataggttttatgaaagatcaaaaattttcaaggc 3318
Query: 661 gttcaaaatgataaaaacacacgtgatctaaatttcttatgatgacagaaggaatacaac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3317 gttcaaaatgataaaaacacacgtgatctaaatttcttatgatgacagaaggaatacaac 3258
Query: 721 attcggtgggttctgacgttttgacatgaacttaatacaacggcgagtacatacagcgat 780
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 3257 attcggtgggttctgacgttttgatatgaacttaatacaacggcgagtacatacagcgat 3198
Query: 781 atgcctcgtctaaaaattgatgttgtcagtggaaagtctaaaacaagtcaattaattat 839
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3197 atgcctcgtctaaaaattgatgttgtcagtggaaagtctaaaacaagtcaattaattat 3139
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5714
Number of Sequences: 1807
Number of extensions: 5714
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 839
length of database: 10,358,551
effective HSP length: 16
effective length of query: 823
effective length of database: 10,329,639
effective search space: 8501292897
effective search space used: 8501292897
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)